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  1. Anchor
    Lipkin66
    Lipkin66
    Lipkin, L.E., Watt, W.C., Kirsch, R.A.: The analysis, synthesis, and description of biological images. Ann N Y Acad Sci. 128(3): 984-1012, 1966.
  2. Anchor
    Lipkin74
    Lipkin74
    Lipkin, L.E., Lemkin, P.F., Carman, G.: Automated autoradiographic grain counting in human determined context. J. Histochem. Cytochem. 22(7): 755-765, 1974. (PDF)
  3. Anchor
    RTPP-JHC-I-paper
    RTPP-JHC-I-paper
    Lemkin, P.F., Carman, G., Lipkin, L., Shapiro, B., Schultz, M., Kaiser, P.: A real time picture processor for use in biologic cell identification. I. System design. J. Histochem. Cytochem. 22(7): 725-731, 1974. (PDF)
  4. Anchor
    RTPP-JHC-II-paper
    RTPP-JHC-II-paper
    Carman, G., Lemkin, P.F., Lipkin, L., Shapiro, B., Schultz, M., Kaiser, P.: A real time picture processor for use in biologic cell identification. II. Hardware implementation. J. Histochem. Cytochem. 22(7): 732-740, 1974. (PDF)
  5. Anchor
    PRDL-ECR-paper
    PRDL-ECR-paper
    Shapiro, B., Lemkin, P.F., Lipkin, L.: The application of artificial intelligence techniques to biologic cell identification. J. Histochem. Cytochem. 22(7): 741-750, 1974. (PDF)
  6. Anchor
    Schultz74
    Schultz74
    Schultz, M.L., Lipkin, L.E., Wade, M.J., Lemkin, P.F., Carman, G.M.: High resolution shading correction. J. Histochem. Cytochem.22(7): 751-754, 1974. (PDF)
  7. Anchor
    Shapiro71
    Shapiro71
    Shapiro, H.M., Bryan, S.D., Lipkin, L.E., Stein, P.G., Lemkin, P.F.: Computer-aided microspectrophotometry of biological specimens. Exp Cell Res. 67(1): 81-89, 1971.
  8. Anchor
    Lemkin79a
    Lemkin79a
    Lemkin, P.F.: The boundary trace transform: An edge and region enhancement transform.   Comp. Graphics Image Processing 9: 150-165, 1979.
  9. Anchor
    Lemkin80a
    Lemkin80a
    Lemkin, P.F., Lipkin, L., Merril, C., Shiffrin, S.: Protein abnormalities in macrophages bearing asbestos. Environ. Health Perspect. 34: 5-89, 1980. (PDF)
  10. Anchor
    Lemkin80b
    Lemkin80b
    Lipkin, L.E.: Cellular effects of asbestos and other fibers: correlations with in vivo induction of pleural sarcoma. Environ. Health Perspect. 34:91-102, 1980. (PDF)
  11. Anchor
    Lemkin79b
    Lemkin79b
    Lemkin, P.F.: An approach to region splitting.   Comp. Graphics Image Processing 10: 281-288, 1979.
  12. Anchor
    Lemkin79c
    Lemkin79c
    Lemkin, P.F., Lipkin, L.: Use of the positive difference transform for RBC elimination in bone marrow smear images. Anal. Quant. Cytol. 1(1): 67-76, 1979.
  13. Anchor
    Lemkin79d
    Lemkin79d
    Lemkin, P.F., Merril, C., Lipkin, L., Van Keuren, M., Oertel, W., Shapiro, B., Wade, M., Schultz, M., Smith, E.: Software aids for the analysis of 2D gel electrophoresis images. Comput. Biomed. Res. 12: 517-544, 1979.
  14. Anchor
    Lemkin80c
    Lemkin80c
    Lester, E.P., Lemkin, P.F., Cooper, H.L., Lipkin, L.E.: Computer-assisted analysis of two-dimensional electrophoresis of human peripheral blood lymphocytes. Clin. Chem. 26: 1392-1402, 1980. (PDF)
  15. Anchor
    Lemkin80d
    Lemkin80d
    Lipkin, L.E., Lemkin, P.F.: Data base techniques for multiple PAGE (2D gel) analysis. Clin. Chem. 26: 1403-1413, 1980. (PDF)
  16. Anchor
    Lemkin81a
    Lemkin81a
    Lemkin, P.F., Lipkin, L.: GELLAB: A computer system for 2D gel electrophoresis analysis. I. Segmentation and preliminaries. Comput. Biomed. Res. 14: 272-297, 1981.
  17. Anchor
    Lemkin81b
    Lemkin81b
    Lemkin, P.F., Lipkin, L.: GELLAB: A computer system for 2D gel electrophoresis analysis. II. Spot pairing. Comput. Biomed. Res. 14: 355-380, 1981.
  18. Anchor
    Lemkin81c
    Lemkin81c
    Lemkin, P.F., Lipkin, L.: GELLAB: A computer system for 2D gel electrophoresis analysis. III. Multiple gel analysis. Comput. Biomed. Res. 14: 407-446, 1981.
  19. Anchor
    Lemkin81d
    Lemkin81d
    Lester, E.P., Lemkin, P.F., Lipkin, L.E.: New dimensions in protein analysis - 2D gels coming of age through Image Processing.   Anal. Chem. 53: 390A-397A, 1981.
  20. Anchor
    Lemkin81e
    Lemkin81e
    Lester, E.P., Lemkin, P.F., Lipkin, L.E., Cooper, H.L.: A two-dimensional electrophoretic analysis of protein synthesis in resting and growing lymphocytes in vitro. J. Immunol. 126: 1428-1434, 1981.
  21. Anchor
    Lemkin82a
    Lemkin82a
    Lemkin, P.F., Lipkin, L.E., Lester, E.P.: Some extensions to the GELLAB 2D electrophoresis gel analysis system. Clin. Chem. 28: 840-849, 1982. (PDF)
  22. Anchor
    Lester82a
    Lester82a
    Lester, E.P., Lemkin, P.F., Lipkin, L.E.: A two-dimensional gel analysis of autologous T and B lymphoblastoid cell lines. Clin. Chem.28: 828-839, 1982. (PDF)
  23. Anchor
    Lester82b
    Lester82b
    Lester, E.P., Lemkin, P.F., Lowery, J.F., Lipkin, L.E.: Human leukemias: A preliminary 2D electrophoretic analysis.   Electrophoresis 3: 364-375, 1982.
  24. Anchor
    Howard83
    Howard83
    Howard, R.J., Aley, S.B., Lemkin, P.F.: High resolution comparison of Plasmodium Knowlesi clones of different variant antigen phenotypes by 2D gel electrophoresis and computer analysis.   Electrophoresis 4: 420-427, 1983.
  25. Anchor
    Lemkin83a
    Lemkin83a
    Lemkin, P.F., Lipkin, L.E.: 2D Electrophoresis gel data base analysis: Aspects of data structures and search strategies in GELLAB.   Electrophoresis 4: 71-81, 1983.
  26. Anchor
    Lester83a
    Lester83a
    Lester, E.P., Lemkin, P.F., Lipkin, L.E.: States of differentiation in leukemias: A 2D gel analysis. In Rowley, J. D. and Ultmann, J. E. (Eds.): Proceedings of 5th Annual Bristol Myers Symposium on Cancer Research.   Chromosomes and Cancer: From Molecules to Man. New York, Academic Press, 1983, pp. 226-245.
  27. Anchor
    Lemkin84a
    Lemkin84a
    Lemkin, P.F., Sonderegger, P., Lipkin, L.: Identification of coordinate pairs of polypeptides: A technique for screening of putative precursor product pairs in 2D gels.Clin. Chem. 30: 1965-1971, 1984. (PDF)
  28. Anchor
    Lester84a
    Lester84a
    Lester, E.P., Lemkin, P F., Lipkin, L.E.: Protein indexing in leukemias and lymphomas. Ann. N.Y. Acad. Sci. 428: 158-172, 1984.
  29. Anchor
    Sonderegger85
    Sonderegger85
    Sonderegger, P., Lemkin, P.F., Lipkin, L., Nelson, P.: Differential modulation of the expression of axonal proteins by non-neuronal cells and the peripheral and central nervous system. EMBO J. 4: 1395-1401, 1985. (PDF)
  30. Anchor
    Lemkin81f
    Lemkin81f
    Lemkin, P.F., Lipkin, L.E.: GELLAB: Multiple 2D electrophoretic gel analysis. In Allen, R. and Arnaud (Eds.):   Electrophoresis '81. New York, W. De Gruyter, 1981, pp. 401-411.
  31. Anchor
    Lemkin83b
    Lemkin83b
    Lemkin, P.F. , Lipkin, L.E.: Database techniques for 2D electrophoretic gel analysis. In Geisow, M. and Barrett, A. (Eds.):   Computing in Biological Science. North Holland, Elsevier, 1983, pp. 181-226.
  32. Anchor
    Lester84a
    Lester84a
    Lester, E.P., Lemkin, P.F.: A 'GELLAB' computer assisted 2D gel analysis of states of differentiation in hematopoietic cells. In Neuhoff, V. (Ed.):   Electrophoresis '84. Chemie, Springer-Verlag, 1984, pp. 309-311.
  33. Anchor
    Lemkin79d
    Lemkin79d
    Lemkin, P.F., Shapiro, B., Lipkin, L., Maizel, J., Sklansky, J., Schultz, M.: Preprocessing of electron micrographs of nucleic acid molecules for automatic analysis by computer. II. Noise removal and gap filling. Comput. Biomed. Res. 12: 615-630, 1979.
  34. Anchor
    Lipkin79b
    Lipkin79b
    Lipkin, L., Lemkin, P.F., Shapiro, B., Sklansky, J.: Preprocessing of electron micrographs of nucleic acid molecules for automatic analysis by computer. Comput. Biomed. Res. 12: 279-289, 1979.
  35. Anchor
    Shapiro77a
    Shapiro77a
    Shapiro, B., Lipkin L.: The circle transform, an articulable shape descriptor. Comput. Biomed. Res. 10: 511-28, 1977.
  36. Anchor
    Shapiro77b
    Shapiro77b
    Shapiro, B.: Language processor generation with BNF inputs: methods and implementation. Comp. Programs. Biomedicine 7:85-98, 1977.
  37. Anchor
    Shapiro79a
    Shapiro79a
    Shapiro, B., Pisa, J., Sklansky, J.: Skeletons from sequential boundary data.   Proc. Intl. Conf. On Pattern Recognition and Image Processing. IEEE Comp. Soc. Press, Los Angeles, CA., 265-270, 1979.
  38. Anchor
    Shapiro81a
    Shapiro81a
    Shapiro, B., Pisa, J., Sklansky, J.: Skeleton generation from xy boundary sequences.   Comp. Vision Graphics Image Processing 15(2) 136-153, 1981.
  39. Anchor
    Shapiro79b
    Shapiro79b
    Shapiro, B.S., Lipkin, L.E., Maizel, J.V.: Computerized generation of secondary structure maps for nucleic acids. Comp. Biomed. Res.12(6):545-568, 1979.
  40. Anchor
    BMON2-CPIB-paper
    BMON2-CPIB-paper
    Lemkin, P.F., Lipkin, L.: BMON2 - A distributed monitor system for biological image processing. Computer Programs in Biomedicine 11: 21-42, 1980. (PDF)Reprinted from COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE, Vol 11, Lemkin PD and LipkinL, BMON2 - A distributed monitor system for biological image processing, Pages 21-42, Copyright (1980), with permission from Elsevier.
  41. Anchor
    Lipkin70
    Lipkin70
    Lipkin, B.S., Rosenfeld, A. (Eds):   Picture Processing and Psychopictorics. Academic Press, New York, 1970, pps 526.
  42. Anchor
    Lipkin89g
    Lipkin89g
    Lemkin, P.F.: GELLAB-II: A workstation based 2D electrophoresis gel analysis system. In Endler, T. and Hanash, S. (Eds.):   Proceedings of 2D Electrophoresis. West Germany, VCH Press, 1989, pp. 52-57. (This was the announcement of GELLAB-II)
  43. Anchor
    Lipkin89h
    Lipkin89h
    Lemkin, P.F., Lester, E.P.: Database and search techniques for 2D gel protein data: A comparison of paradigms for exploratory data analysis and prospects for biological modeling. Electrophoresis 10(2): 122-140, 1989.
  44. Anchor
    Robinson95
    Robinson95
    Robinson, M.K., Myrick, J.E., Henderson, L.O., Coles, C.D., Powell, M.K., Orr, G.A., Lemkin, P.F.: Two-dimensional protein electrophoresis and multiple hypothesis testing to detect potential serum protein biomarkers in children with fetal alcohol syndrome. Electrophoresis 16: 1176-1183, 1995.
  45. Anchor
    Stoeckli89
    Stoeckli89
    Stoeckli, E.T., Lemkin, P.F., Kuhn, T.B., Ruegg, M.A., Heller, M., Sonderegger, P.: Identification of proteins secreted from axons of embryonic dorsal-root-ganglia neurons. Eur. J. Biochem. 180: 249-258, 1989.
  46. Anchor
    Lemkin00a
    Lemkin00a
    Lemkin, P.F., Thornwall, G., Walton, K., Hennighausen, L: The Microarray Explorer tool for data mining of cDNA microarrays - application for the mammary gland, Nucleic Acids Res. 20(22): 4452-4459, 2000.
  47. Anchor
    Shapiro88
    Shapiro88
    Shapiro, B.A.: An algorithm for comparing multiple RNA secondary structures. Comput. Appl. Biosci. 4(3): 387-393, 1988.
  48. Anchor
    Margalit89
    Margalit89
    Margalit, H., Shapiro, B.A., Oppenheim, A.B., Maizel, J.V. Jr.: Detection of common motifs in RNA secondary structures. Nucleic Acids Res. 17(12): 4829-4845, 1989.
  49. Anchor
    Le89
    Le89
    Le, S.Y., Owens, J., Nussinov, R., Chen, J.H., Shapiro, B., Maizel, J.V.: RNA secondary structures: comparison and determination of frequently recurring substructures by consensus. Comput. Appl. Biosci. 5(3): 205-210, 1989.
  50. Anchor
    Shapiro96
    Shapiro96
    Shapiro, B.A., Kasprzak, W.: STRUCTURELAB: a heterogeneous bioinformatics system for RNA structure analysis. J Mol. Graph.14(4): 194-205, 222-224, 1996.

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